13Apr17 version files changed by 4May17 patch:

doc/src/Manual.txt
doc/src/Section_commands.txt
doc/src/Section_errors.txt
doc/src/Section_intro.txt
doc/src/Section_packages.txt
doc/src/Section_start.txt
doc/src/Section_tools.txt
doc/src/angle_sdk.txt
doc/src/bonds.txt
doc/src/compute_sna_atom.txt
doc/src/dump.txt
doc/src/dump_custom_vtk.txt
doc/src/dump_h5md.txt
doc/src/dump_nc.txt
doc/src/dump_netcdf.txt
doc/src/dump_vtk.txt
doc/src/fix_cmap.txt
doc/src/fix_gcmc.txt
doc/src/fix_gle.txt
doc/src/fix_qeq.txt
doc/src/fix_qeq_reax.txt
doc/src/fix_reax_bonds.txt
doc/src/fix_reaxc_species.txt
doc/src/improper_cossq.txt
doc/src/improper_ring.txt
doc/src/lammps.book
doc/src/pair_hybrid.txt
doc/src/pair_modify.txt
doc/src/pair_reax.txt
doc/src/pair_reax_c.txt
doc/src/pair_reaxc.txt
doc/src/pair_sdk.txt
doc/src/pair_srp.txt
doc/src/pairs.txt
doc/src/python.txt
examples/USER/cg-cmm/README
examples/USER/cg-cmm/peg-verlet/data.pegc12e8.gz
examples/USER/cg-cmm/peg-verlet/in.pegc12e8
examples/USER/cg-cmm/peg-verlet/in.pegc12e8-angle
examples/USER/cg-cmm/peg-verlet/log.pegc12e8
examples/USER/cg-cmm/peg-verlet/log.pegc12e8-angle
examples/USER/cg-cmm/sds-monolayer/data.sds.gz
examples/USER/cg-cmm/sds-monolayer/in.sds-hybrid
examples/USER/cg-cmm/sds-monolayer/in.sds-regular
examples/USER/cg-cmm/sds-monolayer/log.sds-hybrid
examples/USER/cg-cmm/sds-monolayer/log.sds-regular
examples/USER/flow_gauss/README
examples/USER/flow_gauss/in.GD
examples/USER/misc/flow_gauss/README
examples/USER/misc/flow_gauss/in.GD
examples/mscg/log.31Mar17.g++.1
lib/Install.py
lib/README
lib/atc/Install.py
lib/atc/README
lib/awpmd/Install.py
lib/awpmd/README
lib/colvars/Install.py
lib/colvars/README
lib/gpu/Install.py
lib/gpu/Nvidia.makefile
lib/gpu/Opencl.makefile
lib/gpu/README
lib/gpu/lal_cg_cmm.cpp
lib/gpu/lal_cg_cmm.cu
lib/gpu/lal_cg_cmm.h
lib/gpu/lal_cg_cmm_ext.cpp
lib/gpu/lal_cg_cmm_long.cpp
lib/gpu/lal_cg_cmm_long.cu
lib/gpu/lal_cg_cmm_long.h
lib/gpu/lal_cg_cmm_long_ext.cpp
lib/gpu/lal_lj_sdk.cpp
lib/gpu/lal_lj_sdk.cu
lib/gpu/lal_lj_sdk.h
lib/gpu/lal_lj_sdk_ext.cpp
lib/gpu/lal_lj_sdk_long.cpp
lib/gpu/lal_lj_sdk_long.cu
lib/gpu/lal_lj_sdk_long.h
lib/gpu/lal_lj_sdk_long_ext.cpp
lib/h5md/Install.py
lib/h5md/Makefile
lib/h5md/Makefile.h5cc
lib/h5md/README
lib/kokkos/CHANGELOG.md
lib/kokkos/CMakeLists.txt
lib/kokkos/Makefile.kokkos
lib/kokkos/Makefile.targets
lib/kokkos/README
lib/kokkos/algorithms/cmake/Dependencies.cmake
lib/kokkos/algorithms/src/Kokkos_Random.hpp
lib/kokkos/algorithms/src/Kokkos_Sort.hpp
lib/kokkos/algorithms/unit_tests/TestSort.hpp
lib/kokkos/bin/nvcc_wrapper
lib/kokkos/cmake/deps/QTHREAD.cmake
lib/kokkos/cmake/deps/QTHREADS.cmake
lib/kokkos/cmake/tpls/FindTPLQTHREAD.cmake
lib/kokkos/cmake/tpls/FindTPLQTHREADS.cmake
lib/kokkos/config/kokkos_dev/config-core-all.sh
lib/kokkos/config/master_history.txt
lib/kokkos/config/test_all_sandia
lib/kokkos/containers/src/Kokkos_DynamicView.hpp
lib/kokkos/containers/src/Kokkos_UnorderedMap.hpp
lib/kokkos/containers/unit_tests/CMakeLists.txt
lib/kokkos/containers/unit_tests/TestDynamicView.hpp
lib/kokkos/core/cmake/Dependencies.cmake
lib/kokkos/core/cmake/KokkosCore_config.h.in
lib/kokkos/core/perf_test/Makefile
lib/kokkos/core/perf_test/PerfTestCuda.cpp
lib/kokkos/core/perf_test/PerfTestDriver.hpp
lib/kokkos/core/perf_test/PerfTestHost.cpp
lib/kokkos/core/perf_test/PerfTestMDRange.hpp
lib/kokkos/core/src/CMakeLists.txt
lib/kokkos/core/src/Cuda/KokkosExp_Cuda_IterateTile.hpp
lib/kokkos/core/src/Cuda/Kokkos_CudaExec.hpp
lib/kokkos/core/src/Cuda/Kokkos_CudaSpace.cpp
lib/kokkos/core/src/Cuda/Kokkos_Cuda_Impl.cpp
lib/kokkos/core/src/Cuda/Kokkos_Cuda_Parallel.hpp
lib/kokkos/core/src/Cuda/Kokkos_Cuda_ReduceScan.hpp
lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.cpp
lib/kokkos/core/src/Cuda/Kokkos_Cuda_Task.hpp
lib/kokkos/core/src/KokkosExp_MDRangePolicy.hpp
lib/kokkos/core/src/Kokkos_Array.hpp
lib/kokkos/core/src/Kokkos_Concepts.hpp
lib/kokkos/core/src/Kokkos_Core.hpp
lib/kokkos/core/src/Kokkos_Core_fwd.hpp
lib/kokkos/core/src/Kokkos_Cuda.hpp
lib/kokkos/core/src/Kokkos_HBWSpace.hpp
lib/kokkos/core/src/Kokkos_HostSpace.hpp
lib/kokkos/core/src/Kokkos_Macros.hpp
lib/kokkos/core/src/Kokkos_MemoryPool.hpp
lib/kokkos/core/src/Kokkos_OpenMP.hpp
lib/kokkos/core/src/Kokkos_Pair.hpp
lib/kokkos/core/src/Kokkos_Parallel.hpp
lib/kokkos/core/src/Kokkos_Parallel_Reduce.hpp
lib/kokkos/core/src/Kokkos_Qthread.hpp
lib/kokkos/core/src/Kokkos_Qthreads.hpp
lib/kokkos/core/src/Kokkos_Serial.hpp
lib/kokkos/core/src/Kokkos_TaskScheduler.hpp
lib/kokkos/core/src/Kokkos_Threads.hpp
lib/kokkos/core/src/Makefile
lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Parallel.hpp
lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.cpp
lib/kokkos/core/src/OpenMP/Kokkos_OpenMP_Task.hpp
lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.cpp
lib/kokkos/core/src/OpenMP/Kokkos_OpenMPexec.hpp
lib/kokkos/core/src/Qthread/Kokkos_QthreadExec.cpp
lib/kokkos/core/src/Qthread/Kokkos_QthreadExec.hpp
lib/kokkos/core/src/Qthread/Kokkos_Qthread_Parallel.hpp
lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.cpp
lib/kokkos/core/src/Qthread/Kokkos_Qthread_TaskPolicy.hpp
lib/kokkos/core/src/Qthread/README
lib/kokkos/core/src/Threads/Kokkos_ThreadsExec.cpp
lib/kokkos/core/src/Threads/Kokkos_ThreadsExec.hpp
lib/kokkos/core/src/Threads/Kokkos_ThreadsTeam.hpp
lib/kokkos/core/src/impl/KokkosExp_Host_IterateTile.hpp
lib/kokkos/core/src/impl/Kokkos_BitOps.hpp
lib/kokkos/core/src/impl/Kokkos_Core.cpp
lib/kokkos/core/src/impl/Kokkos_FunctorAnalysis.hpp
lib/kokkos/core/src/impl/Kokkos_HBWSpace.cpp
lib/kokkos/core/src/impl/Kokkos_HostSpace.cpp
lib/kokkos/core/src/impl/Kokkos_HostThreadTeam.cpp
lib/kokkos/core/src/impl/Kokkos_HostThreadTeam.hpp
lib/kokkos/core/src/impl/Kokkos_Memory_Fence.hpp
lib/kokkos/core/src/impl/Kokkos_OldMacros.hpp
lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.cpp
lib/kokkos/core/src/impl/Kokkos_Profiling_Interface.hpp
lib/kokkos/core/src/impl/Kokkos_Reducer.hpp
lib/kokkos/core/src/impl/Kokkos_Serial.cpp
lib/kokkos/core/src/impl/Kokkos_Serial_Task.cpp
lib/kokkos/core/src/impl/Kokkos_Serial_Task.hpp
lib/kokkos/core/src/impl/Kokkos_Synchronic.hpp
lib/kokkos/core/src/impl/Kokkos_Synchronic_Config.hpp
lib/kokkos/core/src/impl/Kokkos_Synchronic_n3998.hpp
lib/kokkos/core/src/impl/Kokkos_TaskQueue.hpp
lib/kokkos/core/src/impl/Kokkos_TaskQueue_impl.hpp
lib/kokkos/core/src/impl/Kokkos_Utilities.hpp
lib/kokkos/core/src/impl/Kokkos_spinwait.cpp
lib/kokkos/core/src/impl/Kokkos_spinwait.hpp
lib/kokkos/core/unit_test/CMakeLists.txt
lib/kokkos/core/unit_test/Makefile
lib/kokkos/core/unit_test/TestAggregate.hpp
lib/kokkos/core/unit_test/TestAtomic.hpp
lib/kokkos/core/unit_test/TestAtomicOperations.hpp
lib/kokkos/core/unit_test/TestAtomicViews.hpp
lib/kokkos/core/unit_test/TestCXX11.hpp
lib/kokkos/core/unit_test/TestCXX11Deduction.hpp
lib/kokkos/core/unit_test/TestCompilerMacros.hpp
lib/kokkos/core/unit_test/TestDefaultDeviceType.cpp
lib/kokkos/core/unit_test/TestDefaultDeviceTypeInit.hpp
lib/kokkos/core/unit_test/TestDefaultDeviceType_a.cpp
lib/kokkos/core/unit_test/TestDefaultDeviceType_b.cpp
lib/kokkos/core/unit_test/TestDefaultDeviceType_c.cpp
lib/kokkos/core/unit_test/TestDefaultDeviceType_d.cpp
lib/kokkos/core/unit_test/TestHWLOC.cpp
lib/kokkos/core/unit_test/TestMDRange.hpp
lib/kokkos/core/unit_test/TestMemoryPool.hpp
lib/kokkos/core/unit_test/TestPolicyConstruction.hpp
lib/kokkos/core/unit_test/TestQthread.cpp
lib/kokkos/core/unit_test/TestRange.hpp
lib/kokkos/core/unit_test/TestReduce.hpp
lib/kokkos/core/unit_test/TestScan.hpp
lib/kokkos/core/unit_test/TestSharedAlloc.hpp
lib/kokkos/core/unit_test/TestSynchronic.cpp
lib/kokkos/core/unit_test/TestSynchronic.hpp
lib/kokkos/core/unit_test/TestTaskScheduler.hpp
lib/kokkos/core/unit_test/TestTeam.hpp
lib/kokkos/core/unit_test/TestTeamVector.hpp
lib/kokkos/core/unit_test/TestTemplateMetaFunctions.hpp
lib/kokkos/core/unit_test/TestTile.hpp
lib/kokkos/core/unit_test/TestUtilities.hpp
lib/kokkos/core/unit_test/TestViewAPI.hpp
lib/kokkos/core/unit_test/TestViewMapping.hpp
lib/kokkos/core/unit_test/TestViewOfClass.hpp
lib/kokkos/core/unit_test/TestViewSpaceAssign.hpp
lib/kokkos/core/unit_test/TestViewSubview.hpp
lib/kokkos/core/unit_test/UnitTestMain.cpp
lib/kokkos/core/unit_test/cuda/TestCuda.hpp
lib/kokkos/core/unit_test/cuda/TestCuda_Atomics.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_Other.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_Reductions_a.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_Reductions_b.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_Spaces.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_a.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_b.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c01.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c02.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c03.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c04.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c05.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c06.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c07.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c08.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c09.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c10.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c11.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c12.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_SubView_c_all.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_Team.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_a.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_b.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_c.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_d.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_e.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_f.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_g.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_h.cpp
lib/kokkos/core/unit_test/cuda/TestCuda_ViewAPI_s.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP.hpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_Atomics.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_Other.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_Reductions.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_a.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_b.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c01.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c02.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c03.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c04.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c05.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c06.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c07.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c08.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c09.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c10.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c11.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c12.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_SubView_c_all.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_Team.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_a.cpp
lib/kokkos/core/unit_test/openmp/TestOpenMP_ViewAPI_b.cpp
lib/kokkos/core/unit_test/serial/TestSerial.hpp
lib/kokkos/core/unit_test/serial/TestSerial_Atomics.cpp
lib/kokkos/core/unit_test/serial/TestSerial_Other.cpp
lib/kokkos/core/unit_test/serial/TestSerial_Reductions.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_a.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_b.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c01.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c02.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c03.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c04.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c05.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c06.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c07.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c08.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c09.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c10.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c11.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c12.cpp
lib/kokkos/core/unit_test/serial/TestSerial_SubView_c_all.cpp
lib/kokkos/core/unit_test/serial/TestSerial_Team.cpp
lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_a.cpp
lib/kokkos/core/unit_test/serial/TestSerial_ViewAPI_b.cpp
lib/kokkos/core/unit_test/threads/TestThreads.hpp
lib/kokkos/core/unit_test/threads/TestThreads_Atomics.cpp
lib/kokkos/core/unit_test/threads/TestThreads_Other.cpp
lib/kokkos/core/unit_test/threads/TestThreads_Reductions.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_a.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_b.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c01.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c02.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c03.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c04.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c05.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c06.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c07.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c08.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c09.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c10.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c11.cpp
lib/kokkos/core/unit_test/threads/TestThreads_SubView_c12.cpp
lib/kokkos/core/unit_test/threads/TestThreads_Team.cpp
lib/kokkos/core/unit_test/threads/TestThreads_ViewAPI_a.cpp
lib/kokkos/core/unit_test/threads/TestThreads_ViewAPI_b.cpp
lib/kokkos/doc/design_notes_space_instances.md
lib/kokkos/example/md_skeleton/types.h
lib/kokkos/example/tutorial/01_hello_world_lambda/hello_world_lambda.cpp
lib/kokkos/example/tutorial/02_simple_reduce_lambda/simple_reduce_lambda.cpp
lib/kokkos/example/tutorial/03_simple_view_lambda/simple_view_lambda.cpp
lib/kokkos/example/tutorial/Hierarchical_Parallelism/01_thread_teams_lambda/thread_teams_lambda.cpp
lib/kokkos/generate_makefile.bash
lib/kokkos/tpls/gtest/gtest/gtest-test-part.h:
lib/kokkos/tpls/gtest/gtest/gtest-test-part.h:
lib/linalg/Install.py
lib/linalg/README
lib/meam/Install.py
lib/meam/README
lib/molfile/Makefile.lammps
lib/molfile/README
lib/molfile/molfile_plugin.h
lib/molfile/vmdplugin.h
lib/mscg/Install.py
lib/mscg/Makefile.lammps
lib/mscg/README
lib/netcdf/README
lib/poems/Install.py
lib/poems/README
lib/qmmm/Install.py
lib/qmmm/README
lib/reax/Install.py
lib/reax/README
lib/smd/Install.py
lib/smd/README
lib/voronoi/Install.py
lib/voronoi/README
lib/vtk/Makefile.lammps
lib/vtk/README
src/Depend.sh
src/GPU/pair_lj_sdk_coul_long_gpu.cpp
src/GPU/pair_lj_sdk_coul_long_gpu.h
src/GPU/pair_lj_sdk_gpu.cpp
src/GPU/pair_lj_sdk_gpu.h
src/KOKKOS/atom_vec_angle_kokkos.cpp
src/KOKKOS/atom_vec_atomic_kokkos.cpp
src/KOKKOS/atom_vec_bond_kokkos.cpp
src/KOKKOS/atom_vec_charge_kokkos.cpp
src/KOKKOS/atom_vec_full_kokkos.cpp
src/KOKKOS/atom_vec_kokkos.h
src/KOKKOS/atom_vec_molecular_kokkos.cpp
src/KOKKOS/modify_kokkos.cpp
src/KOKKOS/pair_reax_c_kokkos.cpp
src/KSPACE/ewald_disp.cpp
src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
src/KSPACE/pppm_disp.cpp
src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
src/Makefile
src/Purge.list
src/QEQ/fix_qeq_point.cpp
src/RIGID/fix_shake.cpp
src/SNAP/compute_sna_atom.cpp
src/SNAP/compute_sna_atom.h
src/SNAP/compute_snad_atom.cpp
src/SNAP/compute_snad_atom.h
src/SNAP/compute_snav_atom.cpp
src/SNAP/compute_snav_atom.h
src/SNAP/pair_snap.cpp
src/USER-CG-CMM/Install.sh
src/USER-CG-CMM/README
src/USER-CG-CMM/angle_sdk.cpp
src/USER-CG-CMM/angle_sdk.h
src/USER-CG-CMM/lj_sdk_common.h
src/USER-CG-CMM/pair_lj_sdk.cpp
src/USER-CG-CMM/pair_lj_sdk.h
src/USER-CG-CMM/pair_lj_sdk_coul_long.cpp
src/USER-CG-CMM/pair_lj_sdk_coul_long.h
src/USER-CG-CMM/pair_lj_sdk_coul_msm.cpp
src/USER-CG-CMM/pair_lj_sdk_coul_msm.h
src/USER-CGSDK/Install.sh
src/USER-CGSDK/README
src/USER-CGSDK/angle_sdk.cpp
src/USER-CGSDK/angle_sdk.h
src/USER-CGSDK/lj_sdk_common.h
src/USER-CGSDK/pair_lj_sdk.cpp
src/USER-CGSDK/pair_lj_sdk.h
src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
src/USER-CGSDK/pair_lj_sdk_coul_long.h
src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
src/USER-CGSDK/pair_lj_sdk_coul_msm.h
src/USER-MISC/fix_srp.cpp
src/USER-MISC/improper_ring.cpp
src/USER-MOLFILE/README
src/USER-MOLFILE/molfile_plugin.h
src/USER-MOLFILE/vmdplugin.h
src/USER-NC-DUMP/Install.sh
src/USER-NC-DUMP/README
src/USER-NC-DUMP/dump_nc.cpp
src/USER-NC-DUMP/dump_nc.h
src/USER-NC-DUMP/dump_nc_mpiio.cpp
src/USER-NC-DUMP/dump_nc_mpiio.h
src/USER-NETCDF/Install.sh
src/USER-NETCDF/README
src/USER-NETCDF/dump_netcdf.cpp
src/USER-NETCDF/dump_netcdf.h
src/USER-NETCDF/dump_netcdf_mpiio.cpp
src/USER-NETCDF/dump_netcdf_mpiio.h
src/USER-OMP/angle_sdk_omp.h
src/USER-OMP/improper_ring_omp.cpp
src/USER-OMP/pair_lj_sdk_coul_long_omp.h
src/USER-OMP/pair_lj_sdk_coul_msm_omp.h
src/USER-OMP/pair_lj_sdk_omp.h
src/USER-REAXC/compute_spec_atom.cpp
src/USER-REAXC/fix_qeq_reax.cpp
src/USER-REAXC/fix_reax_c.cpp
src/USER-REAXC/fix_reax_c.h
src/USER-REAXC/fix_reaxc.cpp
src/USER-REAXC/fix_reaxc.h
src/USER-REAXC/fix_reaxc_bonds.cpp
src/USER-REAXC/fix_reaxc_species.cpp
src/USER-REAXC/fix_reaxc_species.h
src/USER-REAXC/pair_reax_c.cpp
src/USER-REAXC/pair_reax_c.h
src/USER-REAXC/pair_reaxc.cpp
src/USER-REAXC/pair_reaxc.h
src/USER-REAXC/reaxc_allocate.cpp
src/USER-REAXC/reaxc_bond_orders.cpp
src/USER-REAXC/reaxc_bonds.cpp
src/USER-REAXC/reaxc_control.cpp
src/USER-REAXC/reaxc_defs.h
src/USER-REAXC/reaxc_ffield.cpp
src/USER-REAXC/reaxc_forces.cpp
src/USER-REAXC/reaxc_hydrogen_bonds.cpp
src/USER-REAXC/reaxc_init_md.cpp
src/USER-REAXC/reaxc_io_tools.cpp
src/USER-REAXC/reaxc_list.cpp
src/USER-REAXC/reaxc_lookup.cpp
src/USER-REAXC/reaxc_multi_body.cpp
src/USER-REAXC/reaxc_nonbonded.cpp
src/USER-REAXC/reaxc_reset_tools.cpp
src/USER-REAXC/reaxc_system_props.cpp
src/USER-REAXC/reaxc_tool_box.cpp
src/USER-REAXC/reaxc_torsion_angles.cpp
src/USER-REAXC/reaxc_traj.cpp
src/USER-REAXC/reaxc_types.h
src/USER-REAXC/reaxc_valence_angles.cpp
src/USER-REAXC/reaxc_vector.cpp
src/USER-TALLY/compute_force_tally.cpp
src/USER-TALLY/compute_heat_flux_tally.cpp
src/USER-TALLY/compute_pe_mol_tally.cpp
src/USER-TALLY/compute_pe_tally.cpp
src/USER-TALLY/compute_stress_tally.cpp
src/USER-VTK/README
src/USER-VTK/dump_custom_vtk.cpp
src/USER-VTK/dump_custom_vtk.h
src/USER-VTK/dump_vtk.cpp
src/USER-VTK/dump_vtk.h
src/compute_dipole_chunk.cpp
src/domain.cpp
src/domain.h
src/min.cpp
src/min.h
src/neighbor.cpp
src/pair.h
src/pair_hybrid.cpp
src/pair_hybrid.h
src/version.h
tools/msi2lmp/README
tools/msi2lmp/src/GetParameters.c
tools/msi2lmp/src/InitializeItems.c
tools/msi2lmp/src/WriteDataFile.c
tools/msi2lmp/src/msi2lmp.c
tools/msi2lmp/src/msi2lmp.h