22Sep09 version files changed by 24Sep09 patch: doc/Section_commands.html doc/Section_commands.txt doc/Section_start.html doc/Section_start.txt doc/USER/atc/man_atom_element_map.html doc/USER/atc/man_boundary_integral.html doc/USER/atc/man_contour_integral.html doc/USER/atc/man_disp_control.html doc/USER/atc/man_electron_integration.html doc/USER/atc/man_equilibrium_start.html doc/USER/atc/man_extrinsic_exchange.html doc/USER/atc/man_fem_mesh.html doc/USER/atc/man_filter_scale.html doc/USER/atc/man_fix_atc.html doc/USER/atc/man_fix_flux.html doc/USER/atc/man_fix_nodes.html doc/USER/atc/man_hardy_computes.html doc/USER/atc/man_hardy_fields.html doc/USER/atc/man_hardy_gradients.html doc/USER/atc/man_hardy_kernel.html doc/USER/atc/man_hardy_on_the_fly.html doc/USER/atc/man_hardy_rates.html doc/USER/atc/man_hardy_set.html doc/USER/atc/man_initial.html doc/USER/atc/man_internal_quadrature.html doc/USER/atc/man_mesh_delete_elements.html doc/USER/atc/man_mesh_elemset.html doc/USER/atc/man_mesh_faceset.html doc/USER/atc/man_mesh_nodeset.html doc/USER/atc/man_mesh_output.html doc/USER/atc/man_neighbor_reset_frequency.html doc/USER/atc/man_read_restart.html doc/USER/atc/man_remove_source.html doc/USER/atc/man_source.html doc/USER/atc/man_thermal_control.html doc/USER/atc/man_time_filter.html doc/USER/atc/man_time_integration.html doc/USER/atc/man_transfer_atomic_output.html doc/USER/atc/man_transfer_boundary.html doc/USER/atc/man_transfer_internal.html doc/USER/atc/man_transfer_output.html doc/USER/atc/man_unfix_flux.html doc/USER/atc/man_unfix_nodes.html doc/USER/atc/man_write_restart.html doc/fix_atc.html doc/fix_atc.txt examples/USER/atc/README examples/USER/atc/bar1d_thermal/Ar_thermal.mat examples/USER/atc/bar1d_thermal/bar1d.log examples/USER/atc/bar1d_thermal/bar1d_flux.log examples/USER/atc/bar1d_thermal/in.bar1d examples/USER/atc/bar1d_thermal/in.bar1d_flux examples/USER/atc/bar1d_thermal/in.bar1d_frac_step examples/USER/atc/bar1d_thermal/temp.init examples/USER/atc/bar1d_two_temperature/Ar_ttm.mat examples/USER/atc/bar1d_two_temperature/Cu_ttm.mat examples/USER/atc/bar1d_two_temperature/bar1d_ttm.log examples/USER/atc/bar1d_two_temperature/gaussianIC_ttm.log examples/USER/atc/bar1d_two_temperature/in.bar1d_ttm examples/USER/atc/bar1d_two_temperature/in.gaussianIC_ttm examples/USER/atc/bar1d_two_temperature/in.no_atoms examples/USER/atc/bar1d_two_temperature/in.uniform_exchange examples/USER/atc/bar1d_two_temperature/in.uniform_heating examples/USER/atc/bar1d_two_temperature/no_atoms.log examples/USER/atc/bar1d_two_temperature/temp.init examples/USER/atc/bar1d_two_temperature/uniform_exchange.log examples/USER/atc/bar1d_two_temperature/uniform_exchange_init.data examples/USER/atc/bar1d_two_temperature/uniform_heating.log examples/USER/atc/bar1d_two_temperature/uniform_heating_init.data examples/USER/atc/hardy/consistency.screen examples/USER/atc/hardy/eam_kernel_convergence.screen examples/USER/atc/hardy/eam_unistrain_cell.screen examples/USER/atc/hardy/eam_unistrain_mesh.screen examples/USER/atc/hardy/eam_unistrain_qcylinder.screen examples/USER/atc/hardy/eam_unistrain_qsphere.screen examples/USER/atc/hardy/eam_unistrain_step.screen examples/USER/atc/hardy/eam_volume_stretch.screen examples/USER/atc/hardy/in.consistency examples/USER/atc/hardy/in.eam_kernel_convergence examples/USER/atc/hardy/in.eam_unistrain_cell examples/USER/atc/hardy/in.eam_unistrain_mesh examples/USER/atc/hardy/in.eam_unistrain_qcylinder examples/USER/atc/hardy/in.eam_unistrain_qsphere examples/USER/atc/hardy/in.eam_unistrain_step examples/USER/atc/hardy/in.eam_volume_stretch examples/USER/atc/hardy/in.nvt lib/README lib/atc/ATC_Error.h lib/atc/ATC_HardyKernel.cpp lib/atc/ATC_HardyKernel.h lib/atc/ATC_Transfer.cpp lib/atc/ATC_Transfer.h lib/atc/ATC_TransferHardy.cpp lib/atc/ATC_TransferHardy.h lib/atc/ATC_TransferThermal.cpp lib/atc/ATC_TransferThermal.h lib/atc/ATC_TransferUtility.cpp lib/atc/ATC_TypeDefs.h lib/atc/Array.h lib/atc/Array2D.h lib/atc/AtomicRegulator.cpp lib/atc/AtomicRegulator.h lib/atc/CG.h lib/atc/CloneVector.h lib/atc/DenseMatrix.h lib/atc/DenseVector.h lib/atc/DiagonalMatrix.h lib/atc/ElasticTimeIntegrator.cpp lib/atc/ElasticTimeIntegrator.h lib/atc/ElectronFlux.cpp lib/atc/ElectronFlux.h lib/atc/ElectronHeatCapacity.cpp lib/atc/ElectronHeatCapacity.h lib/atc/ElectronHeatFlux.cpp lib/atc/ElectronHeatFlux.h lib/atc/ElectronPhononExchange.cpp lib/atc/ElectronPhononExchange.h lib/atc/ExtrinsicModel.cpp lib/atc/ExtrinsicModel.h lib/atc/ExtrinsicModelTwoTemperature.cpp lib/atc/ExtrinsicModelTwoTemperature.h lib/atc/FE_Element.cpp lib/atc/FE_Element.h lib/atc/FE_Engine.cpp lib/atc/FE_Engine.h lib/atc/FE_Mesh.cpp lib/atc/FE_Mesh.h lib/atc/FieldEulerIntegrator.cpp lib/atc/FieldEulerIntegrator.h lib/atc/GMRES.h lib/atc/ImplicitSolveOperator.cpp lib/atc/ImplicitSolveOperator.h lib/atc/Kinetostat.cpp lib/atc/Kinetostat.h lib/atc/LammpsInterface.cpp lib/atc/LammpsInterface.h lib/atc/Makefile.g++ lib/atc/Makefile.icc lib/atc/Makefile.serial lib/atc/Material.cpp lib/atc/Material.h lib/atc/Matrix.cpp lib/atc/Matrix.h lib/atc/MatrixDef.h lib/atc/MatrixLibrary.h lib/atc/OutputManager.cpp lib/atc/OutputManager.h lib/atc/PhysicsModel.h lib/atc/PhysicsModelThermal.cpp lib/atc/PhysicsModelThermal.h lib/atc/PhysicsModelTwoTemperature.cpp lib/atc/PhysicsModelTwoTemperature.h lib/atc/PrescribedDataManager.cpp lib/atc/PrescribedDataManager.h lib/atc/Quadrature.h lib/atc/README lib/atc/Solver.cpp lib/atc/Solver.h lib/atc/SparseMatrix-inl.h lib/atc/SparseMatrix.h lib/atc/SparseVector-inl.h lib/atc/SparseVector.h lib/atc/StringManip.h lib/atc/Thermostat.cpp lib/atc/Thermostat.h lib/atc/TimeFilter.cpp lib/atc/TimeFilter.h lib/atc/TimeIntegrator.cpp lib/atc/TimeIntegrator.h lib/atc/Utility.h lib/atc/Vector.cpp lib/atc/Vector.h lib/atc/XT_Function.cpp lib/atc/XT_Function.h src/MAKE/Makefile.altix src/MAKE/Makefile.bgl src/MAKE/Makefile.cheetah src/MAKE/Makefile.crockett src/MAKE/Makefile.cygwin src/MAKE/Makefile.debian src/MAKE/Makefile.diesel src/MAKE/Makefile.encanto src/MAKE/Makefile.fink src/MAKE/Makefile.freebsd src/MAKE/Makefile.g++ src/MAKE/Makefile.glory src/MAKE/Makefile.intel src/MAKE/Makefile.intel_mkl src/MAKE/Makefile.liberty src/MAKE/Makefile.linux src/MAKE/Makefile.mac src/MAKE/Makefile.mac_mpi src/MAKE/Makefile.odin src/MAKE/Makefile.openmpi src/MAKE/Makefile.opensuse src/MAKE/Makefile.pg src/MAKE/Makefile.power5 src/MAKE/Makefile.qed src/MAKE/Makefile.ross src/MAKE/Makefile.sdsc src/MAKE/Makefile.seaborg src/MAKE/Makefile.serial src/MAKE/Makefile.serial_debug src/MAKE/Makefile.serial_icc src/MAKE/Makefile.solaris src/MAKE/Makefile.spirit src/MAKE/Makefile.squall src/MAKE/Makefile.storm src/MAKE/Makefile.tacc src/MAKE/Makefile.tbird src/MAKE/Makefile.tesla src/MAKE/Makefile.tflop src/MAKE/Makefile.valor src/MAKE/Makefile.xt3 src/MAKE/Makefile.ydl src/Makefile src/REAX/Install.csh src/STUBS/mpi.h src/USER-ATC/Install.csh src/USER-ATC/fix_atc.cpp src/USER-ATC/fix_atc.h src/USER-ATC/style_user_atc.h src/style_user_packages.h